The detailed information of tRNA gene sequence


Sequence ID>WENV170021245
Genome IDBBPF01004528
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6726
End posion on genome 6802
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acgacagtca
tRNA gene sequence 
CGGGGTGTAGCGCAGCTTGGTAGCGCACGTGCTTTGGGAGCATGGGGCCGTGGGTTCGAA
TCCCTCCACCCCGACCA
Downstream region at tRNA end position 
tactgttaaa
Secondary structure (Cloverleaf model)
>WENV170021245	Pro	TGG
                   a      ACCA tactgttaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C G A        A      |   | | |     G
    T       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    G + T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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