The detailed information of tRNA gene sequence


Sequence ID>WENV170021251
Genome IDBBPF01004817
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6098
End posion on genome 6173
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gatgtctggc
tRNA gene sequence 
GGCCCCATAGTGAAGCGGTTTAACACACCAGCCTTTCACGCTGGCGACACGGGTTCGAAT
CCCGTTGGGGTCACCA
Downstream region at tRNA end position 
atggagctgt
Secondary structure (Cloverleaf model)
>WENV170021251	Glu	TTC
                   c      ACCA atggagctgt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        A      | | | | |     G
    G       A G T G       A C G G G     C
    G         | | |                 T T
    T       A C A C
      T T A        A     CGAC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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