The detailed information of tRNA gene sequence


Sequence ID>WENV170021256
Genome IDBBPF01004884
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2604
End posion on genome 2516
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaagtaattt
tRNA gene sequence 
GGAGGGGTCGGATAATGGTTATTCCAAAAGTTTGCTAAACTTTGACGGCGAAAGTCGTCT
TGTGGGTTCGAGTCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
tttttcaaaa
Secondary structure (Cloverleaf model)
>WENV170021256	Ser	GCT
                   t      GCCA tttttcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C A C C C     A
      T A A        C      | | | | |     G
    G       T A G G       G T G G G     C
    G         | | |                 T T
    T       T T C C
      T A          A     GACGGCGAAAGTCGTCTT
                    A - T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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