The detailed information of tRNA gene sequence


Sequence ID>WENV170021257
Genome IDBBPF01004884
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 187
End posion on genome 100
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcttaaaac
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTTTAACGGAATAGTTTGGAGAACTATGGCCTTCACGGGTCTC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
attttcaaaa
Secondary structure (Cloverleaf model)
>WENV170021257	Ser	GGA
                   c      GCCA attttcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T T A        A     GGCCTTCACGGGTCTC
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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