The detailed information of tRNA gene sequence


Sequence ID>WENV170021270
Genome IDBBPF01005073
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 9356
End posion on genome 9270
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaggggtaa
tRNA gene sequence 
GGAGGAGTCGGATAGTGGTTGATTCCGCGGCACTGGAGATGCCGTATACCCGAAAGGGTA
TCGTGGGTTCAAATCTCAGCTACTCCCacc
Downstream region at tRNA end position 
caaagtcgat
Secondary structure (Cloverleaf model)
>WENV170021270	Ser	GGA
                   a      Cacc caaagtcgat
                     G - C
                     G - C
                     A - T
                     G - C
                     G   A
                     A - T
                     G - C          T A
                    T     G A C T C     A
      T G A        C        | | + |     A
    G       T A G G       G T G G G     C
    G         | | |                 T T
    T       T T C C
      T G A        G     TATACCCGAAAGGGTATC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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