The detailed information of tRNA gene sequence


Sequence ID>WENV170021293
Genome IDBBPF01005662
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2640
End posion on genome 2564
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attgttgtct
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTCAGAGCGGCCGGCTCATAACCGGTTGGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
tacttaatct
Secondary structure (Cloverleaf model)
>WENV170021293	Met	CAT
                   t      ACCA tacttaatct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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