The detailed information of tRNA gene sequence


Sequence ID>WENV170021312
Genome IDBBPF01005919
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1032
End posion on genome 1107
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtggggtttg
tRNA gene sequence 
AGGCCCGTAGCTCAAGTGGCAGAGCGGCGGACTCCAAATCCGCAGGCTGGGGGTTCAAGT
CCTCCCGGGCCTGCCA
Downstream region at tRNA end position 
acgaggggag
Secondary structure (Cloverleaf model)
>WENV170021312	Trp	CCA
                   g      GCCA acgaggggag
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C C T C C     A
      G A A        A      | | + | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGCT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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