The detailed information of tRNA gene sequence


Sequence ID>WENV170021327
Genome IDBBPF01006432
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 463
End posion on genome 534
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cgttgtttag
tRNA gene sequence 
GGGCCTATATTTTAATGGTAGAATATCTCGATGGCATCGAGAAGATGGGAGTTCGATTCT
CCCTAGGTCCACat
Downstream region at tRNA end position 
tttagaaaag
Secondary structure (Cloverleaf model)
>WENV170021327	Ala	GGC
                   g      ACat tttagaaaag
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     A - T          T T
                    T     C C C T C     A
        A A        A      | | | | |     G
      T     T T T T       G G G A G     C
      G     + | |                   T T
      G     G A A T
        T A        A     AGAT
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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