The detailed information of tRNA gene sequence


Sequence ID>WENV170021331
Genome IDBBPF01006461
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 474
End posion on genome 563
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatataaaat
tRNA gene sequence 
GGTGGGGTGGCTGAGCCCGGTTTAAGGCGCCGCACTCGAAATGCGGTATGCCCGAAAGGA
CATCGTGAGTTCAAATCTCACCCCCACCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170021331	Ser	CGA
                   t      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
    C C G A        G      | | | | |     A
  C         G T C G       G T G A G     C
  G           + | |                 T T
  G         A G G C
    T T T A        G     TATGCCCGAAAGGACATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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