The detailed information of tRNA gene sequence


Sequence ID>WENV170021339
Genome IDBBPF01006545
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 157
End posion on genome 68
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agggttagct
tRNA gene sequence 
GGAGAAGTGCCCGAGTGGCTTAAGGGGCGTGCCTGGAGAGCACGTGTGGGTTTATGCTCA
CCCCGGGTTCGAATCCCGGCTTCTCCGCCA
Downstream region at tRNA end position 
ttcaggaaac
Secondary structure (Cloverleaf model)
>WENV170021339	Ser	GGA
                   t      GCCA ttcaggaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G C C C       C C G G G     C
    G         | | |                 T T
    C       A G G G
      T T A        G     TGTGGGTTTATGCTCACC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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