The detailed information of tRNA gene sequence


Sequence ID>WENV170021389
Genome IDBBPF01008035
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 18942
End posion on genome 19030
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaaagagtt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGCGTGTATATCTCAAAAGGGT
ATCGCGGGTTCGAATCCCGCCTTCTCCGCag
Downstream region at tRNA end position 
aaatagaaaa
Secondary structure (Cloverleaf model)
>WENV170021389	Ser	GGA
                   t      GCag aaatagaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATATCTCAAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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