The detailed information of tRNA gene sequence


Sequence ID>WENV170021403
Genome IDBBPF01008921
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 990
End posion on genome 1074
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aattattttt
tRNA gene sequence 
GGAGGGTTGGCAGAATGGCAATGCGCTGGTTTTGAAAACCAGTGGGCGCAAGCCCTTGCA
GGTTCGAGTCCTGCACCCTCCGCCA
Downstream region at tRNA end position 
gtcaggattt
Secondary structure (Cloverleaf model)
>WENV170021403	Ser	TGA
                   t      GCCA gtcaggattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T G
                    T     C G T C C     A
        A A        G      | | | | |     G
      T     G A C G       G C A G G     C
      G       | | |                 T T
      G     A T G C
        C A        G     TGGGCGCAAGCCCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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