The detailed information of tRNA gene sequence


Sequence ID>WENV170021407
Genome IDBBPF01009027
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2483
End posion on genome 2410
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taagtgttaA
tRNA gene sequence 
GCCAAGGTAGCTTAGAGGCGAAGCGGTGGACTGCAGATCCATTACACGGGAGTTCAAATC
TCCCCCTTGGCTTta
Downstream region at tRNA end position 
aaccatttat
Secondary structure (Cloverleaf model)
>WENV170021407	Cys	GCA
                   A      TTta aaccatttat
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
        G A        A      | | | | |     A
      A     T T C G       G G G A G     C
      G     | | | |                 T T
      G     A A G C
        C G        G     TACAC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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