The detailed information of tRNA gene sequence


Sequence ID>WENV170021422
Genome IDBBPF01010065
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 118
End posion on genome 43
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tatattaatt
tRNA gene sequence 
GGGCATTTAGCTCAGTGGTTAGAGCGCTACATTCACATTGTAGAGGTCACTGGTTCGAGT
CCAGTAGTGCCCACCA
Downstream region at tRNA end position 
aaaccagact
Secondary structure (Cloverleaf model)
>WENV170021422	Val	CAC
                   t      ACCA aaaccagact
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     T + G
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    G       C T C G       A C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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