The detailed information of tRNA gene sequence


Sequence ID>WENV170021471
Genome IDBBPF01013285
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 620
End posion on genome 692
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttatgttact
tRNA gene sequence 
GCCCTAGTGGCTCAGCCGGTAGAGCGATACCTTGGTAAGGTATAGGTCGGGGGTTCGAAT
CCCCCCTAGGGCTtat
Downstream region at tRNA end position 
aaattaattt
Secondary structure (Cloverleaf model)
>WENV170021471	Thr	GGT
                   t      Ttat aaattaattt
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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