The detailed information of tRNA gene sequence


Sequence ID>WENV170021493
Genome IDBBPF01014784
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 99
End posion on genome 172
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgattaaga
tRNA gene sequence 
GGCGGTGTAGCTTAACGGTAGAGCAAGTCCCTCATAAAGACAAGACGGTGGTTCGACTCC
ACCCATCGCCACCA
Downstream region at tRNA end position 
caaccccctt
Secondary structure (Cloverleaf model)
>WENV170021493	Met	CAT
                   a      ACCA caaccccctt
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     T - A
                     G - C          T C
                    T     C C A C C     A
        A A        A      | | | | |     G
      C     T T C G       G G T G G     C
      G     + | | |                 T T
      G     G A G C
        T A        A     AGAC
                    A   A
                    G - C
                    T - A
                    C - G
                    C   A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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