The detailed information of tRNA gene sequence


Sequence ID>WENV170021500
Genome IDBBPF01015580
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 789
End posion on genome 879
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaacaatcag
tRNA gene sequence 
GGAAGCGTGCCTGAGTGGCTTAAAGGGACGGTCTTGAAAACCGTTATACTCGTAAAGAGT
ATCGGAGGTTCGAATCCTCCCGCTTCCGCCA
Downstream region at tRNA end position 
attttcagaa
Secondary structure (Cloverleaf model)
>WENV170021500	Ser	TGA
                   g      GCCA attttcagaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
      T G A        G      | | | | |     G
    G       G T C C       G G A G G     C
    G         | | |                 T T
    C       A A G G
      T T A        G     TATACTCGTAAAGAGTATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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