The detailed information of tRNA gene sequence


Sequence ID>WENV170021521
Genome IDBBPF01018528
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 131
End posion on genome 48
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aaaataataa
tRNA gene sequence 
GCCGAAGTGGTGAAATTGGAAAACACGATGGATTCAAAATCCATTGCTTGCAAAAGCTTG
TGGGTTCGAGTCCCACCTTCGGCAtac
Downstream region at tRNA end position 
taaaaaagcc
Secondary structure (Cloverleaf model)
>WENV170021521	Leu	CAA
                   a      Atac taaaaaagcc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       A G T G       G T G G G     C
    G         | | |                 T T
    G       A C A C
      A A A        G     TGCTTGCAAAAGCTT
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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