The detailed information of tRNA gene sequence


Sequence ID>WENV170021531
Genome IDBBPF01020269
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 552
End posion on genome 641
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaataaattt
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTTATAACGGCGCTGTTTCGAAAACAGTTGGTCTTTTTTAAGG
CACGTGGGTTCGAATCCCACCCTCTCCGCCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170021531	Ser	CGA
                   t      GCCn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  T         A C G G
    A T A          C     TGGTCTTTTTTAAGGCAC
                    G + T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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