The detailed information of tRNA gene sequence


Sequence ID>WENV170021533
Genome IDBBPF01022003
Search identical group
Phylum/Class[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 631
End posion on genome 557
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cggaaattaa
tRNA gene sequence 
GGACACGTCGTCCAACGGCTAGGACACGGCGTTGTCAACGCTGAAATCGGGGTTCGATTC
CCCGCGGGTCCGCCA
Downstream region at tRNA end position 
acgctacgcc
Secondary structure (Cloverleaf model)
>WENV170021533	Asp	GTC
                   a      GCCA acgctacgcc
                     G - C
                     G - C
                     A - T
                     C - G
                     A   G
                     C - G
                     G - C          T T
                    T     G C C C C     A
      C A A        C      | | | | |     G
    G       C C T G       C G G G G     C
    G       | | | |                 T T
    C       G G A C
      T A          A     AAAT
                    C - G
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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