The detailed information of tRNA gene sequence


Sequence ID>WENV170021980
Genome IDBBPG01007096
Search identical group
Phylum/Class[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3839
End posion on genome 3928
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccaagtttaa
tRNA gene sequence 
GGAGAGGTGCAAGAGTGGTTTAATTGGCGGTCCTGGAAAGACCGTGTGCCTTTACGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCT
Downstream region at tRNA end position 
ttgnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170021980	Ser	GGA
                   a      GCCT ttgnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A A C       G T G G G     C
    G         | | |                 T T
    T       A T T G
      T T A        G     TGTGCCTTTACGGGTACC
                    C - G
                    G - C
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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