The detailed information of tRNA gene sequence


Sequence ID>WENV170022139
Genome IDBCQK01000673
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 2977
End posion on genome 3066
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcggcttat
tRNA gene sequence 
GGTGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCTAGCAATAGTC
TCCAGGGTTCGAATCCCTGTCTCACCGCCA
Downstream region at tRNA end position 
ccctgactaa
Secondary structure (Cloverleaf model)
>WENV170022139	Ser	GGA
                   t      GCCA ccctgactaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCTAGCAATAGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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