The detailed information of tRNA gene sequence


Sequence ID>WENV170022207
Genome IDBCQK01001614
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 3182
End posion on genome 3272
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatttaacat
tRNA gene sequence 
GGAGTCGTACCCAAGCCCGGCTGAAGGGGACGGACTCGAAATCCGTTAGGGGTCGTAAGG
CCCGCGTGGGTTCGAATCCCACCGACTCCGCtt
Downstream region at tRNA end position 
atatcgagca
Secondary structure (Cloverleaf model)
>WENV170022207	Ser	CGA
                   t      GCtt atatcgagca
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     G
  C         A C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        G     TAGGGGTCGTAAGGCCCGC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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