The detailed information of tRNA gene sequence


Sequence ID>WENV170022567
Genome IDBCQK01021392
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 152
End posion on genome 77
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagttttatt
tRNA gene sequence 
TACGGGGTAGAGTAAAACGGTTAACTCATTAGGCTCATGACCTAAAAATTATAGGTTCGA
ATCCTATTCCCGTACCtt
Downstream region at tRNA end position 
actaaatttt
Secondary structure (Cloverleaf model)
>WENV170022567	Met	CAT
                   t      CCtt actaaatttt
                     T - A
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     T A T C C     A
    A A A A        A      | | | | |     G
  C         T G A G       A T A G G     C
  G         | | | |                 T T
  G         A C T C
    T T A          A     AAATT
                    T - A
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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