The detailed information of tRNA gene sequence


Sequence ID>WENV170022590
Genome IDBCQK01023804
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 460
End posion on genome 374
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agaaaataaa
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTAACGGAGCAGATTGCTAATCTGTCGACGCGTAAGTGTCGCA
TGGGTTCGAGTCCCATTCTCTCCGCAA
Downstream region at tRNA end position 
ttttctttta
Secondary structure (Cloverleaf model)
>WENV170022590	Ser	GCT
                   a      GCAA ttttctttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     T A C C C     A
        G A        G      | | | | |     G
      T     G G C C       A T G G G     C
      G       | | |                 T T
      G     A C G G
        T A        A     CGACGCGTAAGTGTCGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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