The detailed information of tRNA gene sequence


Sequence ID>WENV170022681
Genome IDBCQK01035247
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 405
End posion on genome 494
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
catcgccgac
tRNA gene sequence 
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTAGCCTTCGGGTTA
CCGAGGGTTCGAATCCCTCACCTTCCGCCA
Downstream region at tRNA end position 
aaaagtttgt
Secondary structure (Cloverleaf model)
>WENV170022681	Ser	CGA
                   c      GCCA aaaagtttgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTAGCCTTCGGGTTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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