The detailed information of tRNA gene sequence


Sequence ID>WENV170022938
Genome IDBCQK01081261
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 475
End posion on genome 560
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataaatatta
tRNA gene sequence 
AGAGAGTTGGCTGAGCGGTTTAAGGCGGCTAGCTTGAGTCTAGCTAAAGGTAAAAACTTT
CATATGTTCGAATCATATACTCTCTGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170022938	Ser	TGA
                   a      Gnnn nnnnnnnnnn
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T A T A C     A
      C G A        G      | | | | |     G
    G       G T C G       A T A T G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TAAAGGTAAAAACTTTC
                    G - C
                    C - G
                    T - A
                    A - T
                    G - C
                  C       T
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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