The detailed information of tRNA gene sequence


Sequence ID>WENV170023090
Genome IDBCQK01123979
Search identical group
Phylum/Class[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
Species
Start position on genome 410
End posion on genome 333
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaagtcataa
tRNA gene sequence 
GGATCGGTGCCGGAGTGGTCTAACGGCGTGGATTGCAAATCCATCGTGTCGGGGGTTCGA
ATCCCTCCCGATCCTCCA
Downstream region at tRNA end position 
aattttactt
Secondary structure (Cloverleaf model)
>WENV170023090	Cys	GCA
                   a      TCCA aattttactt
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      C T A        C     CGTGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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