The detailed information of tRNA gene sequence


Sequence ID>WENV170023677
Genome IDBCQL01001070
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 2283
End posion on genome 2204
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttggggca
tRNA gene sequence 
GGAGAAATGCCAGAGTGGTTATTGGGTTCGTTTGCTAAGCGAATAGTTATACTTCGAGAG
TTCGAATCTCTCTTTCTCTGagg
Downstream region at tRNA end position 
aggagaagta
Secondary structure (Cloverleaf model)
>WENV170023677	Ser	GCT
                   a      Gagg aggagaagta
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G A G     C
    G       + | | |                 T T
    T       T T G G
      T A          G     TAGTTATACTTC
                    T - A
                    T - A
                    C - G
                    G - C
                    T + G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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