The detailed information of tRNA gene sequence


Sequence ID>WENV170024053
Genome IDBCQL01017312
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 176
End posion on genome 265
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acaaaaattt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTTTAGGGTTAAACCTA
ACGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aataaaaaag
Secondary structure (Cloverleaf model)
>WENV170024053	Ser	GGA
                   t      GCCA aataaaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TTTAGGGTTAAACCTAAC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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