The detailed information of tRNA gene sequence


Sequence ID>WENV170024088
Genome IDBCQL01019102
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 1238
End posion on genome 1327
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaggggaac
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTTAAAGCGGTGACTTGCTAAGTCACCATACAATAAGAACTT
GTATCATGGGTTCAAATCCCATTTTCTCCAaaa
Downstream region at tRNA end position 
attaatgtaa
Secondary structure (Cloverleaf model)
>WENV170024088	Ser	GCT
                   c      Aaaa attaatgtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     A - T          T A
                    T     T A C C C     A
      T G A        G      | | | | |     A
    G       G T C G       A T G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     CATACAATAAGAACTTGTATC
                    G - C
                    T - A
                    G - C
                    A - T
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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