The detailed information of tRNA gene sequence


Sequence ID>WENV170024785
Genome IDBCQL01126530
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 406
End posion on genome 334
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agggggttag
tRNA gene sequence 
GGAAAGATAGTTCAATTGGTAGAATTTTGGTCTCCAAAGCCAAGGGTTGGGGGTTCAAGT
CCCTCTCTTTCTGtag
Downstream region at tRNA end position 
gttcaatatt
Secondary structure (Cloverleaf model)
>WENV170024785	Trp	CCA
                   g      Gtag gttcaatatt
                     G + T
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T T G       G G G G G     C
    G       | | | +                 T T
    G       G A A T
      T A          T     GGGTT
                    T - A
                    T - A
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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