The detailed information of tRNA gene sequence


Sequence ID>WENV170024832
Genome IDBCQL01137800
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 454
End posion on genome 529
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttttcttttt
tRNA gene sequence 
GGCTAGATAGCAAAATTGGTTATGCAAAAGATTGCAAATCTTTCATATATTGGTTCGAAT
CCGATTCTAGCTTCAA
Downstream region at tRNA end position 
aatttagtan
Secondary structure (Cloverleaf model)
>WENV170024832	Cys	GCA
                   t      TCAA aatttagtan
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     A - T          T A
                    T     T A G C C     A
      T A A        A      | | + | |     G
    T       A A C G       A T T G G     C
    G         | | |                 T T
    G       A T G C
      T T          A     CATAT
                    A - T
                    A - T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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