The detailed information of tRNA gene sequence


Sequence ID>WENV170025104
Genome IDBCQL01217852
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 417
End posion on genome 341
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnnnnncggt
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTGCCTTCGGGAGGCAGGGGCCGGAGGTTCGAA
TCCTCTCACTCCGACCA
Downstream region at tRNA end position 
acaaaatcaa
Secondary structure (Cloverleaf model)
>WENV170025104	Pro	CGG
                   t      ACCA acaaaatcaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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