The detailed information of tRNA gene sequence


Sequence ID>WENV170025219
Genome IDBCQL01258904
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 344
End posion on genome 269
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaagggtaaa
tRNA gene sequence 
AGGGTAGTAGCTCAGTTGGTAGAGCACCGGTCTCCAAAACCGGCGGTCGTGGGTTCGAGT
CCCTCCTGCCCTGCCA
Downstream region at tRNA end position 
ctcaattttt
Secondary structure (Cloverleaf model)
>WENV170025219	Trp	CCA
                   a      GCCA ctcaattttt
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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