The detailed information of tRNA gene sequence


Sequence ID>WENV170025420
Genome IDBCQL01328497
Search identical group
Phylum/Class[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
Species
Start position on genome 330
End posion on genome 241
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGAGGTTTGGCAGAGTGGTCGAATGCACCGGTCTTGAAAACCGACGGGCGTGAAAGCGTC
CCCAGGGTTCGAATCCCTGAGCCTCCGCCA
Downstream region at tRNA end position 
ttatttcagc
Secondary structure (Cloverleaf model)
>WENV170025420	Ser	TGA
                   c      GCCA ttatttcagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CGGGCGTGAAAGCGTCCC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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