The detailed information of tRNA gene sequence


Sequence ID>WENV170025821
Genome IDCCXY01000048
Search identical group
Phylum/Class[CCXY] groundwater metagenome; sulfidic groundwater
Species
Start position on genome 5811
End posion on genome 5738
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttatttttta
tRNA gene sequence 
GGGGTCGTAGGGTAGCTTGGTTATCCTTTTAGCTTTGGGAGCTAGAGACCTGAGTTCAAA
TCTCGGCGACCCCAtga
Downstream region at tRNA end position 
aaatttttag
Secondary structure (Cloverleaf model)
>WENV170025821	Pro	TGG
                   a      Atga aaatttttag
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G G C T C     A
    T C G A        A      | + | | |     A
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    T T A          T     AGAC
                    T + G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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