The detailed information of tRNA gene sequence


Sequence ID>ENV08002088
Genome IDABOL01143191
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 87
End posion on genome 11
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atacctttat
tRNA gene sequence 
AGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCAAG
TCCACTCAGGCCTACCA
Downstream region at tRNA end position 
cttcttcgaa
Secondary structure (Cloverleaf model)
>ENV08002088	Ile	GAT
                   t      ACCA cttcttcgaa
                     A - T
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     T C A C C     A
      G G A        A      + | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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