The detailed information of tRNA gene sequence


Sequence ID>ENV08002089
Genome IDABOL01145437
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 87
End posion on genome 14
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
ccttggtcgc
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCAGAAGCTTCCCAAGCTTACGACGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
ttttcgtgaa
Secondary structure (Cloverleaf model)
>ENV08002089	Gly	CCC
                   c      TCCA ttttcgtgaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     CGAC
                    G   A
                    A - T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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