The detailed information of tRNA gene sequence


Sequence ID>ENV08002119
Genome IDABOL01213270
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 17
End posion on genome 91
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaagagtcaa
tRNA gene sequence 
GGCCCCGTAGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGTGGGTTCAAG
TCCCATCGGGGTCGCtg
Downstream region at tRNA end position 
aagcggtgat
Secondary structure (Cloverleaf model)
>ENV08002119	Asp	GTC
                   a      GCtg aagcggtgat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     A
    T       C G C G       G T G G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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