The detailed information of tRNA gene sequence


Sequence ID>ENV08002145
Genome IDABOL01289226
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 20
End posion on genome 95
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ataacttcat
tRNA gene sequence 
GGCCCCGTAGTGCAGCGGCCTAGCACGCGGCCCTCTCAAGGCTGAAACGGCGGTTCGAAT
CCGCTCGGGGCTACCA
Downstream region at tRNA end position 
atggtagatg
Secondary structure (Cloverleaf model)
>ENV08002145	Glu	CTC
                   t      ACCA atggtagatg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C G C C     A
      C G A        A      + | | | |     G
    G       C G T G       G G C G G     C
    G       | | | |                 T T
    C       G C A C
      C T A        G     AAAC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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