The detailed information of tRNA gene sequence


Sequence ID>ENV08002158
Genome IDABOL01351117
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 88
End posion on genome 12
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gcatctcaat
tRNA gene sequence 
GCGCCCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCATAGGTTCGAA
TCCTATAGGGCGTGCCA
Downstream region at tRNA end position 
ttacttcctt
Secondary structure (Cloverleaf model)
>ENV08002158	Arg	TCT
                   t      GCCA ttacttcctt
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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