The detailed information of tRNA gene sequence


Sequence ID>ENV08002170
Genome IDABOL01411802
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 84
End posion on genome 9
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacattattc
tRNA gene sequence 
GGCCCTTTAGCTCAGCGGTTAGAGCTTGCGACTCATAATCGCCAGGTCACTGGTTCAAAT
CCAGTAAGGGTCACCA
Downstream region at tRNA end position 
gatgttccnn
Secondary structure (Cloverleaf model)
>ENV08002170	Met	CAT
                   c      ACCA gatgttccnn
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     T G A C C     A
      C G A        A      | | | | |     A
    G       C T C G       A C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTC
                    T   C
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK