The detailed information of tRNA gene sequence


Sequence ID>W141383026
Genome IDJDFL01000049
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus VPCR-2009 [JDFL]
Start position on genome 11141
End posion on genome 11217
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gatagggcat
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCGTTGGCCTCCGGAGCCAAAGGTCGAAGGTTCGAA
TCCTTTCGGGCGTACCA
Downstream region at tRNA end position 
taccccggag
Secondary structure (Cloverleaf model)
>W141383026	Arg	CCG
                   t      ACCA taccccggag
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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