The detailed information of tRNA gene sequence


Sequence ID>ENV08002201
Genome IDABON01008872
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 78
End posion on genome 4
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aagccggtgc
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTCAGGACGCGGCCCTTTCACGGCTGAAACACGGGTTCGATTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
tctnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08002201	Glu	TTC
                   c      ACCA tctnnnnnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          G     AAAC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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