The detailed information of tRNA gene sequence


Sequence ID>ENV08002223
Genome IDABPP01001881
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 01; altitude 310m AMSL; sample depth 1m below water level, 0-1mm depth into the mat
Species
Start position on genome 483
End posion on genome 409
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cccggcggcg
tRNA gene sequence 
GCCGCAGTAGCTCAGTGGTAGAGCGCACCCTTGGTAAGGGTGAGGTCGGGAGTTCAATCC
TCCCCTGCGGCACCA
Downstream region at tRNA end position 
ccgcgaccac
Secondary structure (Cloverleaf model)
>ENV08002223	Thr	GGT
                   g      ACCA ccgcgaccac
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          C T
                    T     C C C T C     A
        G A        A      | | | | |     A
      T     C T C G       G G G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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