The detailed information of tRNA gene sequence


Sequence ID>ENV08002240
Genome IDABPP01005490
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 01; altitude 310m AMSL; sample depth 1m below water level, 0-1mm depth into the mat
Species
Start position on genome 403
End posion on genome 489
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
ctgaacacgt
tRNA gene sequence 
GCGGTCGTGGCGGAATTGGTAGACGCGCAGCGTTGAGGTCGCTGTGGGGTAACTCCCGTG
GAAGTTCGAGTCTTCTCGACCGCACCA
Downstream region at tRNA end position 
atcacccata
Secondary structure (Cloverleaf model)
>ENV08002240	Leu	GAG
                   t      ACCA atcacccata
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     T C T T C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGGGTAACTCCCGT
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       T
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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