The detailed information of tRNA gene sequence


Sequence ID>ENV08002264
Genome IDABPP01011540
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 01; altitude 310m AMSL; sample depth 1m below water level, 0-1mm depth into the mat
Species
Start position on genome 452
End posion on genome 528
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cattttattt
tRNA gene sequence 
AGTCCTGTAGCTCAGTTGGTTAGAGCACTACACTGATAATGTAGGGGTCAGCAGTTCAAG
TCTGCTCAGGACTACGA
Downstream region at tRNA end position 
ataaaatggg
Secondary structure (Cloverleaf model)
>ENV08002264	Ile	GAT
                   t      ACGA ataaaatggg
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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