The detailed information of tRNA gene sequence


Sequence ID>ENV08002274
Genome IDABPQ01000709
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 02; altitude 310m AMSL; sample depth 1m below water level, 1-2mm depth into the mat
Species
Start position on genome 358
End posion on genome 442
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
agaatttaaa
tRNA gene sequence 
GGTGGGGTTCCCGAGTGGTCAAAGGGAACAGACTGTAAATCTGTCGGCGACGCCTTCGGA
GGTTCAAATCCTCCCCCCACCACCA
Downstream region at tRNA end position 
tatttaagtt
Secondary structure (Cloverleaf model)
>ENV08002274	Tyr	GTA
                   a      ACCA tatttaagtt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
      T G A        T      | | | | |     A
    G       G C C C       G G A G G     C
    G         | | |                 T T
    T       A G G G
      C A A        A     CGGCGACGCCTTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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