The detailed information of tRNA gene sequence


Sequence ID>ENV08002303
Genome IDABPQ01008800
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 02; altitude 310m AMSL; sample depth 1m below water level, 1-2mm depth into the mat
Species
Start position on genome 392
End posion on genome 465
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
gttcttctac
tRNA gene sequence 
TGGCTGATCGTCCAATGGCAGGACTACGGACTCTGACTCCGTCAATCTAGGTTCGAATCC
TAGTCAGCCAGCCA
Downstream region at tRNA end position 
ctgataataa
Secondary structure (Cloverleaf model)
>ENV08002303	Gln	CTG
                   c      GCCA ctgataataa
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T          T A
                    T     G A T C C     A
        A A        C      | | | | |     G
      T     C C T G       C T A G G     C
      G     | | | |                 T T
      G     G G A C
        C A        T     CAAT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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